 Developed by V. Suresh, K. Ganesan and S. Parthasarathy* Dept. of Bioinformatics, Bharathidasan University, Tiruchirappalli 620 024, India * For correspondence bdupartha@gmail.com
The PredictFold PB is a fold recognition server based on Protein Blocks, which are one of the Structural Alphabets used to describe regions of the protein backbone. Here, we present a protein fold recognition method based on Protein Blocks for the annotation of twilight zone sequences. In our method, we align the predicted Protein Blocks of a query amino acid sequence with a library of assigned Protein Blocks of 953 known folds using the local pair-wise alignment.
Click here to use the PredictFold pb server Click here to get supplementary data. Reference Suresh V, Ganesan K & Parthasarathy S (2012) A Protein Block based Fold Recognition method for the Annotation of Twilight Zone Sequences. Protein & Peptide Letters, 20(3) 249 - 254.
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