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Repeats regions & their secondary structure in the PDBID : 3aoi_A

>3aoi_A mol:protein length:315 DNA-directed RNA polymerase subunit alpha
87-99
VRFLNPSLQTVTL
120-132
VEIMNPDLHIATL
EE STT SEEEE
EES S EEEEE
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Repeats regions & their secondary structure in the PDBID : 3aoi_B

>3aoi_B mol:protein length:315 DNA-directed RNA polymerase subunit alpha
87-99
VRFLNPSLQTVTL
120-132
VEIMNPDLHIATL
EEE STT SEEEE
EEES S EEEEB
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Repeats regions & their secondary structure in the PDBID : 3aoi_F

>3aoi_F mol:protein length:315 DNA-directed RNA polymerase subunit alpha
87-99
VRFLNPSLQTVTL
120-132
VEIMNPDLHIATL
EE STT SEEEE
EES S EEEEE
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 3aoi_G

>3aoi_G mol:protein length:315 DNA-directed RNA polymerase subunit alpha
87-99
VRFLNPSLQTVTL
120-132
VEIMNPDLHIATL
EEE STT SEEEE
EEES S EEEEB
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 3aoi_K

>3aoi_K mol:protein length:315 DNA-directed RNA polymerase subunit alpha
87-99
VRFLNPSLQTVTL
120-132
VEIMNPDLHIATL
EE STT SEEEE
EES S EEEEE
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 3aoi_L

>3aoi_L mol:protein length:315 DNA-directed RNA polymerase subunit alpha
87-99
VRFLNPSLQTVTL
120-132
VEIMNPDLHIATL
EEE STT SEEEE
EEES TT EEEEB
PDB View PDBsum View Pfam View

Repeats regions & their secondary structure in the PDBID : 3aoi_C

>3aoi_C mol:protein length:1119 DNA-directed RNA polymerase subunit beta
761-884
FKGESEPTPEERLLRSI...FGEKardvkdtslrvpPGEG.GIVVRTVR.LRRGDPGVELKPGvrevvRVYVAQKRKLQVGDKLANRHGNKG.......VVAKIL......PVEDMPHLPDGTPVDVIL.NPLGVPSRMNlGQ
906-1030
FDGAKEPEIKELLAQAFevyFGKR............KGEGfGVDKREVEvLRRAEKLGLVTPG.....KTPEEQLKELFLQGKVVLYDGRTGepiegpiVVGQMFimklyhMVEDKMHARSTGPYSLITqQPLGGKAQFG.GQ
xxx xxxxxxxxxxxx x B EE xSS EEEEEEEEExxxxx SS SS SSEEEEEEEEEEEExxxxxxxEE TTxxxxxx EEEETTS EEEEEEEE xGGGS B SSSx B
TTS HHHHHHHHHHHHxxxHHHTxxxxxxxxxxxxHHHHxHTT HxHHHHHHHHHHTTTxxxxxSS TTS HHHHHHHHHHTTEE Bxxxxxxx SSS xxxxxxB SS EEEEEEEEEEBS x GGGS EESxS
630-641
RSNQGTALDQRP
648-659
RVRKGDLLADGP
E TTSBEE EE
EE TT EEEE S
304-348
....................................................LPTLRYLFALTAGVP........GHEVDDI..DHLGNRRIRTV..GELMTDQFRVGL
349-451
ARLARGVRermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnpLSSLRHKRRISALGPggltreraGFDVRDVhrTHYG..RICPVetPE....GANIGL
453-482
TSLAAYAR......................................................................VDEL..GFIRTPYRRVV..GGVVTDE.....
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHH SxxxxxxxxS TxxTSGGGEEE HxxHHHHHHHHHHHH
HHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHSS TTT HHHxxxxxxxxH SHHHxxHHHHxxHHHHHxxHSxxxxTTEEE
EE SS ExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxE TTxxS EEEEEEEEExxTTEEEEExxxxx
170-246
PWIDLEVEPNGVVSMKVNKRKFplVLLLRVLGYDQETLARELGAYgELVQGLMDESVFAMR..PEEALIRLFTLLRPGD
678-753
PFDGYNFEDAIVISEELLKRDF..YTSIHIERYEIEARDTKLGPE.RITRDIPHLSEAALRdlDEEGVVRIGAEVKPGD
EEEEE SSSSEEEEETTEEExx HHHHHHHHT HHHHHHHHHxSS SGGGGTTT SSSxxTT STHHHHHHHHTSS
SSTTSSSEEEEEHHHHHTT xxSEEEEEEEEEEEEE TT x SS TT STTSSxxS SSSB TT EE T
5-16
RFGR.IREVIPLP
154-166
RPGRyIASIIPLP
E xS S
SS xEEEEEE S
484-528
VYMTATEED..RYTIAQANTPLEGNriaaervVARRKGEPVIVSPEE
578-617
VVMTGLEERvvRDSLAALYAEEDGE.......VAKVDGNRIVVRYED
EEE HHHHHxxTS EE TTS BSSSxxxxxxxBB SSEEEESSSSE
SEE S HHHxxHHHHHTSSEE SSSxxxxxxxEEEEEE SSEEEEEE
63-75
GLVLDFLEYRLGE
259-271
GLIADPRRYDLGE
EEEEEEEEEE
TSSSSS S TTT
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Repeats regions & their secondary structure in the PDBID : 3aoi_H

>3aoi_H mol:protein length:1119 DNA-directed RNA polymerase subunit beta
761-884
FKGESEPTPEERLLRSI...FGEKardvkdtslrvpPGEG.GIVVRTVR.LRRGDPGVELKPGvrevvRVYVAQKRKLQVGDKLANRHGNKG.......VVAKIL......PVEDMPHLPDGTPVDVIL.NPLGVPSRMNlGQ
906-1030
FDGAKEPEIKELLAQAFevyFGKR............KGEGfGVDKREVEvLRRAEKLGLVTPG.....KTPEEQLKELFLQGKVVLYDGRTGepiegpiVVGQMFimklyhMVEDKMHARSTGPYSLITqQPLGGKAQFG.GQ
xxx xxxxxxxxxxxx x EE xSS EEEEEEEEExxxxx SS SS SS EEEEEEEEExxxxxxxEE TTxxxxxx EEEETTS EEEEEEEE xGGGS B SSSx B
TTS HHHHHHHHHHHHxxxHHHTxxxxxxxxxxxxHHHHxHTT HxHHHHHHHHHHTTTxxxxxSS TTS HHHHHHHHHHTTEE Bxxxxxxx SSS xxxxxxB SS EEEEEEEEEEBS x GGGS EESxS
630-641
RSNQGTALDQRP
648-659
RVRKGDLLADGP
E TTSBEE EE
EE TT EEEE S
304-348
....................................................LPTLRYLFALTAGVP........GHEVDDI..DHLGNRRIRTV..GELMTDQFRVGL
349-451
ARLARGVRermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnpLSSLRHKRRISALGPggltreraGFDVRDVhrTHYG..RICPVetPE....GANIGL
453-482
TSLAAYAR......................................................................VDEL..GFIRTPYRRVV..GGVVTDE.....
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHS SxxxxxxxxS TxxTSGGGEEEE HxxHHHHHHHHHHHH
HHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHSS TTT HHHxxxxxxxxH SHHHxxHHHHxxHHHHHxxHSxxxxTTEEE
EE SS ExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxE TTxxS EEEEEEEEExxTTEEEEExxxxx
170-246
PWIDLEVEPNGVVSMKVNKRKFplVLLLRVLGYDQETLARELGAYgELVQGLMDESVFAMR..PEEALIRLFTLLRPGD
678-753
PFDGYNFEDAIVISEELLKRDF..YTSIHIERYEIEARDTKLGPE.RITRDIPHLSEAALRdlDEEGVVRIGAEVKPGD
EEEEEETTEEEEEEETTEEExxESHHHHHHHT HHHHHHHHHxSS SGGGGTTT SSSxxTT STHHHHHHHHHH
SSTTSSSEEEEEHHHHHTT xxSEEEEEEEEEEE TT x SS TT STTSSxxS SSSB TT EE T
5-16
RFGR.IREVIPLP
154-166
RPGRyIASIIPLP
E xS S
SS xEEEEE
484-528
VYMTATEED..RYTIAQANTPLEGNriaaervVARRKGEPVIVSPEE
578-617
VVMTGLEERvvRDSLAALYAEEDGE.......VAKVDGNRIVVRYED
EEEEHHHHTxxTS EE S S BSSSxxxxxxxBB SSEEEESSSSE
SEE S HHHxxHHHHHT SEE SSSxxxxxxxEEEEEE SSEEEEEE
63-75
GLVLDFLEYRLGE
259-271
GLIADPRRYDLGE
EEEEEEEEEE
TSSSSS TTT
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Repeats regions & their secondary structure in the PDBID : 3aoi_M

>3aoi_M mol:protein length:1119 DNA-directed RNA polymerase subunit beta
761-884
FKGESEPTPEERLLRSI...FGEKardvkdtslrvpPGEG.GIVVRTVR.LRRGDPGVELKPGvrevvRVYVAQKRKLQVGDKLANRHGNKG.......VVAKIL......PVEDMPHLPDGTPVDVIL.NPLGVPSRMNlGQ
906-1030
FDGAKEPEIKELLAQAFevyFGKR............KGEGfGVDKREVEvLRRAEKLGLVTPG.....KTPEEQLKELFLQGKVVLYDGRTGepiegpiVVGQMFimklyhMVEDKMHARSTGPYSLITqQPLGGKAQFG.GQ
xxx xxxxxxxxxxxx x EE xTT EEEEEEEEExxxxx SS SS SS EEEEEEEEEExxxxxxxEE TTxxxxxx EEEETTS EEEEEEEE xGGGS B SSSx B
TTS HHHHHHHHHHHHxxxHHHTxxxxxxxxxxxxHHHHxHTT HxHHHHHHHHHHTTTxxxxxSS TTS HHHHHHHHHHTTEE Bxxxxxxx SSS xxxxxxB SS EEEEEEEEEEBS x GGGS EEESxS
630-641
RSNQGTALDQRP
648-659
RVRKGDLLADGP
E TTSBEE EE
EE TT EEEE S
304-348
....................................................LPTLRYLFALTAGVP........GHEVDDI..DHLGNRRIRTV..GELMTDQFRVGL
349-451
ARLARGVRermlmgsedsltpaklvnsrpleaaireffsrsqlsqfkdetnpLSSLRHKRRISALGPggltreraGFDVRDVhrTHYG..RICPVetPE....GANIGL
453-482
TSLAAYAR......................................................................VDEL..GFIRTPYRRVV..GGVVTDE.....
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHH SxxxxxxxxS TxxTSGGG EEE HxxHHHHHHHHHHHH
HHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHSS TTT HHHxxxxxxxxH SHHHxxHHHHxxHHHHHxxHSxxxxTTEEE
EE SS ExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxE TTxxS EEEEEEEEExxTTEEEEExxxxx
170-246
PWIDLEVEPNGVVSMKVNKRKFplVLLLRVLGYDQETLARELGAYgELVQGLMDESVFAMR..PEEALIRLFTLLRPGD
678-753
PFDGYNFEDAIVISEELLKRDF..YTSIHIERYEIEARDTKLGPE.RITRDIPHLSEAALRdlDEEGVVRIGAEVKPGD
EEEEE TTSSEEEEESS xx HHHHHHHHT HHHHHHHHSxSS S GGGTTT SSSxxTT STHHHHHHHHHSS
SSTTSSSEEEEEHHHHHTT xxSEEEEEEEEEEEE TT x SS TT STTSSxxS SSSB TT EE T
5-16
RFGR.IREVIPLP
154-166
RPGRyIASIIPLP
E xS S
SS x EEEEE
484-528
VYMTATEED..RYTIAQANTPLEGNriaaervVARRKGEPVIVSPEE
578-617
VVMTGLEERvvRDSLAALYAEEDGE.......VAKVDGNRIVVRYED
EEE HHHHTxxTS EE S S BSSSxxxxxxxBB SSEEEESSSSE
SEE S HHHxxHHHHHT SEE SSSxxxxxxxEEEEEE SSEEEEEE
63-75
GLVLDFLEYRLGE
259-271
GLIADPRRYDLGE
EEEEEEEEE
TSSSSS TTT
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Repeats regions & their secondary structure in the PDBID : 3aoi_D

>3aoi_D mol:protein length:1524 DNA-directed RNA polymerase subunit beta'
2-194
..........................KK.E..VRKVRIAL.ASPEKIRSWSYGEV..EKPETINY.RTlkpERDGLF................D..ErifgPIKDYECACGkYKRQRFEGKVCERcGVEVTKS.....IVRRYRMGHIELATPAAHIW...FVK.DV..PS..KIGTLLDLSATEL..EQVLYFS......KYI.VLDPKGAILngvpVEKRQLLTDEEYrelrygKQETYPLPPGVD.ALVKDGEEVVKGQELA.PG
195-424
VVSRLDGVAL.YRFPRRV...RVEYVKK.E..RAGLRLPL.AAWVEKEAYKPGEILAELPEPYLF.RA...EEEGVVELKELEEGAFLVLRRED..E....PVATYFLPVG.MTPLVVHGEIVEK.GQPLAEAKGLLRMPRQVRAAQVEAEEEGETVYLTLFLEWTE..PKDYRVQPHMNVVVPEG..ARVEAGD......KIVAAIDPEEEVI....AEAEGVVHLHEPasilvvKARVYPFEDDVE...VSTGDRVAPGDVLA.DG
427-595
VKSDVYG.........RV...EVDLVRNvV..RVVESYDI.DARMGAEAIQ..QLLKELDLEAL.......EKELLEEMKHPSRARRAKARKRL..E.....VVRAFLDSG.NRP...........................................EWMILEAVPvlPPDLR..PMVQV...DG..GRFATSDlndlyrRLINRNNRLKKLL......AQGA.....P..eiiiRNEKRMLQEAVD.ALLDNGR...RGAPVTnPG
603-794
LTDILSG.KQ.GRFRQNLlgkRVDYSGR.SviVVGPQLKL......HQCGLPKRMALELFKPFLLkKM...EEKGIA..PNVKAARRMLERQRDikD....EVWDAL.......EEVIHGKVVL.....LNRAPTLHRL..GIQAFQ.PVLVEGQSIQLHPLVCEAF..NADFD.GDQMAVHVPLSsfAQAEARI......QMLSA....HNLL....SPASG.........................ePLAKPSRDIILGLYYI.TQ
795-882
VRKEKKGAGLeFATPEEA...LAAHERG.E..VA.LNAPIkVAGRETSVGRLKYVFAN.PDEALL..A...VAHGIVDLQDVVTVRYMGKRLET..S....PGRILF.................................................................................................................................................................
xxxxxxxxxxxxxxxxxxxxxxxxxx x xx EEEEE x HHHHHHHEEEE xx SxS xxxSS TTxxxxxxxxxxxxxxxxSxxSxxxxS TTTS S x x xxxxx GGG EEEEExxxEEExEExxE xxHHHHSSSS HHHHxxHH S TTxxxxxxTHHxHHHHSSSSBxxxx S SSSxxxxxxS SS HHHxHHHHTS EEEEE TxT
S SEEExE S ExxxE x xx x x xxx xx xxxx x x xx TT EE S TTxx SS xxxxxxB EE S SSS Bxxxx TT EE xxxxxxSEEEEESEEEEExxx SS S TT EE xTT
EE SS ExxxxxxxxxEExxxEEETTTTxExxEEEES x BTHHHHxxHHHHHH HHHxxxxxxxHHHHHHHHHHSS HHHHHHHHHHxxHxxxxxHHHHHHHHHx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGGGEEEEExxEE SxxTT xxx xx xxxxxx HHHHHHHHHHxxxxxxHHHHxxxxxHxxxxxxHHHHHS HHHxHHHHHHHxxxHHHHHHxHH
HHHHHSSxTTxSSTTHHHxxxH B SSxExxEEEEEEE xxxxxxSSS TTEEEEEHHHHHHHTxHHxxxHHHHHHxxHHSTT SSHHHHHHHxxHxxxxHT S xxxxxxxHHHHHHHHHHxxxxxHSTT EEEExx SS SxGGGEEEEEEEEESSSSEEExx GGGGxTTTT TTT ExxEEEE xxxxxxSHHHHxxxxHHHHxxxxHTSBTxxxxxxxxxxxxxxxxxxxxxxxxxxTT B SSSSSBS x H
S x SS SHxxxHHHHHHHxHxxHHxTTSS xTT SS HHHHH EExSSHHHHxxHxxxHHHHTTSS TT EEE SS EExx xxxx HHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1246-1270
VAGAADITQGLPRVIELFEARRPKA
1319-1343
VEAGQPLTRGAIDPHQLLEAKGPEA
SHHHHHHHHTT SS
E TT BSSSSB HHHHHHHT HHH
891-933
EDEKVAWE.....LIQLDVPQEKNSLKD.LVYQAFLRLGMEKTARLLDA
958-1006
EEKKQYLEeadrkLLQIEQAYEMGFLTDrERYDQILQLWTETTEKVTQA
S HHHHHHxxxxxS TTS HHHHHHxHHHHHHHHH HHHHHHHHHH
TTHHHHHHxxxxxHHHHHHHHHHHHHTTxT S HHHHHHHHHHHHHHHH
1097-1185
KLVDVTHEIVVREadcgTTNYISVPlfQPDEvTRSL..RLRKRADIEAgLYGRVLAR.EVEV......LGVR...LEEGRYLS....MDDVHLLIKAAEAGEIQE
1362-1458
KLHDKHIEIVVRQ....MMKYVEVT..DPGD.SRLLegQVLEKWDVEA.LNERLIAEgKTPVawkpllMGVTksaLSTKSWLSaasfQNTTHVLTEAAIAGKKDE
HHHHHHTT xxxxS xxEE x EE xx SSSS EE x HHHHHHHxHTTExxxxxxEBSSxxx EE SS ExxxxE SS EE HHHHHHHHHH
HHHHHHHHHHxxxxTTSEEEESxxS SSxS TTxx EEEHHHHHHxHHHHHHTTxS S xxxxxx xxxEEEE HxxxxHHHHHT S HHHHTTSS
935-950
KYYGFTFSTTSGITIG
1203-1218
KCYGYDLSMARPVSIG
HHHHHHHHHHTT
HHH S SSSSSS TT
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Repeats regions & their secondary structure in the PDBID : 3aoi_I

>3aoi_I mol:protein length:1524 DNA-directed RNA polymerase subunit beta'
2-194
..........................KK.E..VRKVRIAL.ASPEKIRSWSYGEV..EKPETINY.RTlkpERDGLF................D..ErifgPIKDYECACGkYKRQRFEGKVCERcGVEVTKS.....IVRRYRMGHIELATPAAHIW...FVK.DV..PS..KIGTLLDLSATEL..EQVLYFS......KYI.VLDPKGAILngvpVEKRQLLTDEEYrelrygKQETYPLPPGVD.ALVKDGEEVVKGQELA.PG
195-424
VVSRLDGVAL.YRFPRRV...RVEYVKK.E..RAGLRLPL.AAWVEKEAYKPGEILAELPEPYLF.RA...EEEGVVELKELEEGAFLVLRRED..E....PVATYFLPVG.MTPLVVHGEIVEK.GQPLAEAKGLLRMPRQVRAAQVEAEEEGETVYLTLFLEWTE..PKDYRVQPHMNVVVPEG..ARVEAGD......KIVAAIDPEEEVI....AEAEGVVHLHEPasilvvKARVYPFEDDVE...VSTGDRVAPGDVLA.DG
427-595
VKSDVYG.........RV...EVDLVRNvV..RVVESYDI.DARMGAEAIQ..QLLKELDLEAL.......EKELLEEMKHPSRARRAKARKRL..E.....VVRAFLDSG.NRP...........................................EWMILEAVPvlPPDLR..PMVQV...DG..GRFATSDlndlyrRLINRNNRLKKLL......AQGA.....P..eiiiRNEKRMLQEAVD.ALLDNGR...RGAPVTnPG
603-794
LTDILSG.KQ.GRFRQNLlgkRVDYSGR.SviVVGPQLKL......HQCGLPKRMALELFKPFLLkKM...EEKGIA..PNVKAARRMLERQRDikD....EVWDAL.......EEVIHGKVVL.....LNRAPTLHRL..GIQAFQ.PVLVEGQSIQLHPLVCEAF..NADFD.GDQMAVHVPLSsfAQAEARI......QMLSA....HNLL....SPASG.........................ePLAKPSRDIILGLYYI.TQ
795-882
VRKEKKGAGLeFATPEEA...LAAHERG.E..VA.LNAPIkVAGRETSVGRLKYVFAN.PDEALL..A...VAHGIVDLQDVVTVRYMGKRLET..S....PGRILF.................................................................................................................................................................
xxxxxxxxxxxxxxxxxxxxxxxxxx xSxx EEEEE x HHHHHHH SB xx S S SxSSxxxSS TTxxxxxxxxxxxxxxxxSxxSxxxxS TTTT x x xxxxx EEEExxxEEExEExxE xxHHHHSSSS HHHHxxHHTS TTxxxxxxHHHxHHHHSS Bxxxx S SSSxxxxxx SS HHHxHHHHTT EEEEE TxT
SS EEEExE xxx x xx x x xxx xx xxxx x x xx xx xxxxxx xxxx xxxxxx EEEEESEEEEExxx SS B S SS EE xTT
EE S ExxxxxxxxxEExxxEEETTTTxExxEEEES x BTHHHHxxHHHHHH HHHxxxxxxxHHHHHHHHHHSS HHHHHHHHHHxxHxxxxxHHHHHHHHHx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGGGEEEEExxEE GxxGG xxx xx xxxxxx THHHHHHHHHHxxxxxxHHHHxxxxxHxxxxxxHHHHHS HHHxHHHHHHHxxxHHHHHHxHH
HHHHHSSxTTxSSTTHHHxxxH SSxExxEEEEEEE xxxxxxSSS TTEEEEEHHHHHHHTxHHxxxHHHHHHxxHHSTT SSHHHHHHHxxHxxxxSSGGG xxxxxxx HHHHHHHHHxxxxxHSTT EEEExx SS SxGGGEEEEEEEEESSSSEEExx GGGGxTTTT TTT ExxEEEE xxxxxxSHHHHxxxxHHHHxxxxHTSBTxxxxxxxxxxxxxxxxxxxxxxxxxxTT B SSSSSBSS x H
S xTTSS SHxxxHHHHHHHxHxxHHxTTSS xTT SS HHHHH EExSSHHHHxxHxxxHHHHTTSS TT EEE SS EExx xxxx HHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1246-1270
VAGAADITQGLPRVIELFEARRPKA
1319-1343
VEAGQPLTRGAIDPHQLLEAKGPEA
SHHHHHHHHTT SS
E TT BSSSSB HHHHHHHT HHH
891-933
EDEKVAWE.....LIQLDVPQEKNSLKD.LVYQAFLRLGMEKTARLLDA
958-1006
EEKKQYLEeadrkLLQIEQAYEMGFLTDrERYDQILQLWTETTEKVTQA
S HHHHHHxxxxxS TTS HHHHHHxHHHHHHHHH HHHHHHHHHH
TTHHHHHHxxxxxHHHHHHHHHHHHHTTxT S HHHHHHHHHHHHHHHH
1097-1185
KLVDVTHEIVVREadcgTTNYISVPlfQPDEvTRSL..RLRKRADIEAgLYGRVLAR.EVEV......LGVR...LEEGRYLS....MDDVHLLIKAAEAGEIQE
1362-1458
KLHDKHIEIVVRQ....MMKYVEVT..DPGD.SRLLegQVLEKWDVEA.LNERLIAEgKTPVawkpllMGVTksaLSTKSWLSaasfQNTTHVLTEAAIAGKKDE
HHHHHHTT xxxxS xxEE x EE xx SSSS EE x HHHHHHHxHTTExxxxxxEBSSxxx EE SS ExxxxE SS EE HHHHHHHHHH
HHHHHHHHHHxxxxTTSEEEESxxS SSxS TTxx EEEHHHHHHxHHHHHHTTxS S xxxxxx xxxEEEE HxxxxHHHHHT S HHHHHHSS
935-950
KYYGFTFSTTSGITIG
1203-1218
KCYGYDLSMARPVSIG
HHHHHHHHHHTT
HHH S SSSSSS TT
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Repeats regions & their secondary structure in the PDBID : 3aoi_N

>3aoi_N mol:protein length:1524 DNA-directed RNA polymerase subunit beta'
2-194
..........................KK.E..VRKVRIAL.ASPEKIRSWSYGEV..EKPETINY.RTlkpERDGLF................D..ErifgPIKDYECACGkYKRQRFEGKVCERcGVEVTKS.....IVRRYRMGHIELATPAAHIW...FVK.DV..PS..KIGTLLDLSATEL..EQVLYFS......KYI.VLDPKGAILngvpVEKRQLLTDEEYrelrygKQETYPLPPGVD.ALVKDGEEVVKGQELA.PG
195-424
VVSRLDGVAL.YRFPRRV...RVEYVKK.E..RAGLRLPL.AAWVEKEAYKPGEILAELPEPYLF.RA...EEEGVVELKELEEGAFLVLRRED..E....PVATYFLPVG.MTPLVVHGEIVEK.GQPLAEAKGLLRMPRQVRAAQVEAEEEGETVYLTLFLEWTE..PKDYRVQPHMNVVVPEG..ARVEAGD......KIVAAIDPEEEVI....AEAEGVVHLHEPasilvvKARVYPFEDDVE...VSTGDRVAPGDVLA.DG
427-595
VKSDVYG.........RV...EVDLVRNvV..RVVESYDI.DARMGAEAIQ..QLLKELDLEAL.......EKELLEEMKHPSRARRAKARKRL..E.....VVRAFLDSG.NRP...........................................EWMILEAVPvlPPDLR..PMVQV...DG..GRFATSDlndlyrRLINRNNRLKKLL......AQGA.....P..eiiiRNEKRMLQEAVD.ALLDNGR...RGAPVTnPG
603-794
LTDILSG.KQ.GRFRQNLlgkRVDYSGR.SviVVGPQLKL......HQCGLPKRMALELFKPFLLkKM...EEKGIA..PNVKAARRMLERQRDikD....EVWDAL.......EEVIHGKVVL.....LNRAPTLHRL..GIQAFQ.PVLVEGQSIQLHPLVCEAF..NADFD.GDQMAVHVPLSsfAQAEARI......QMLSA....HNLL....SPASG.........................ePLAKPSRDIILGLYYI.TQ
795-882
VRKEKKGAGLeFATPEEA...LAAHERG.E..VA.LNAPIkVAGRETSVGRLKYVFAN.PDEALL..A...VAHGIVDLQDVVTVRYMGKRLET..S....PGRILF.................................................................................................................................................................
xxxxxxxxxxxxxxxxxxxxxxxxxx x xx EEEEE x HHHHHHHEEEE xx S TxTSxxxSS TTxxxxxxxxxxxxxxxxSxxSxxxx TTTS SSx x xxxxx HHHHHT EEEEExxxEEExEExxE xxHHHHSSSS HHHHxxHHTS TTxxxxxxHHHxHHHHSS xxxx S SSSxxxxxx SS HHHxHHHHTT EEEEE TxT
SS EEEExES EEEExxxEEEE x xx x x xxx xx xxxx x x ExxEE TT EE S TTxx B TT xxxxxx EE S SSS xxxx SSB EEEEExxxxxxSEEEEESEEEEExxx SS S SS EE xTT
EE S ExxxxxxxxxEExxxEEETTTTxExxEEEES x HHHHHxxHHHHHH HHHxxxxxxxHHHHHHHHHHSS HHHHHHHHHHxxHxxxxxHHHHHHHHHx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGGGEEEEExxEE SxxTT xxx xx xxxxxx THHHHHHHHHHxxxxxxHHHHxxxxxHxxxxxxHHHHHS HHHxHHHHHHHxxxHHHHHHxHH
TTTTTSSxTTxSSTTHHHxxxH B SSxExxEEEEEEE xxxxxxSSS TTEEEEEHHHHHHHTxHHxxxHHHHHHxxHHSTT SSHHHHHHHxxHxxxxHH SS xxxxxxx HHHHHHHHHxxxxxHSTT EEEExx SS SxGGGEEEEEEEEESSSSEEExx GGGGxTTTT TTT ExxEEEE xxxxxxSHHHHxxxxHHHHxxxxHTSBTxxxxxxxxxxxxxxxxxxxxxxxxxxTT B SSSSSBSS x H
S x SS SHxxxHHHHHHHxHxxHHxTTSS xTT SS HHHHH EExSSHHHHxxHxxxHHHHTTSS TT EEE SS EExx xxxx HHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
1246-1270
VAGAADITQGLPRVIELFEARRPKA
1319-1343
VEAGQPLTRGAIDPHQLLEAKGPEA
SHHHHHHHHTT SS
E TT BSSSSB HHHHHHHT HHH
891-933
EDEKVAWE.....LIQLDVPQEKNSLKD.LVYQAFLRLGMEKTARLLDA
958-1006
EEKKQYLEeadrkLLQIEQAYEMGFLTDrERYDQILQLWTETTEKVTQA
S HHHHHHxxxxxS TTS HHHHHHxHHHHHHHHH HHHHHHHHHH
TTHHHHHHxxxxxHHHHHHHHHHHHHTTxT S HHHHHHHHHHHHHHHH
1097-1185
KLVDVTHEIVVREadcgTTNYISVPlfQPDEvTRSL..RLRKRADIEAgLYGRVLAR.EVEV......LGVR...LEEGRYLS....MDDVHLLIKAAEAGEIQE
1362-1458
KLHDKHIEIVVRQ....MMKYVEVT..DPGD.SRLLegQVLEKWDVEA.LNERLIAEgKTPVawkpllMGVTksaLSTKSWLSaasfQNTTHVLTEAAIAGKKDE
HHHHHHTT xxxxS xxEE x EE xx SSSS EE x HHHHHHHxHTTExxxxxxEBSSxxx EE SS ExxxxE TT EE HHHHHHHHHH
HHHHHHHHHHxxxxTTSEEEESxxS SSxS TTxx EEEHHHHHHxHHHHHHTTxS S xxxxxx xxxEEEE HxxxxHHHHHT S HHHHTTSS
935-950
KYYGFTFSTTSGITIG
1203-1218
KCYGYDLSMARPVSIG
HHHHHHHHHHTT
HHH S SSSSSS TT
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Repeats regions & their secondary structure in the PDBID : 3aoi_X

>3aoi_X mol:protein length:156 Anti-cleavage anti-GreA transcription factor
69-81
LSRAVILEEG.SGE
85-98
LGSVVELEDPlSGE
HHSEEE SxS S
TT EEEEE TxTT
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Repeats regions & their secondary structure in the PDBID : 3aoi_Y

>3aoi_Y mol:protein length:156 Anti-cleavage anti-GreA transcription factor
69-81
LSRAVILEEG.SGE
85-98
LGSVVELEDPlSGE
HHS EE SxS S
TT EEEEE TxTT
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Repeats regions & their secondary structure in the PDBID : 3aoi_Z

>3aoi_Z mol:protein length:156 Anti-cleavage anti-GreA transcription factor
69-81
LSRAVILEEG.SGE
85-98
LGSVVELEDPlSGE
HHT EE SxS S
TT EEEEE TxTT
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