Department of Bioinformatics, School of Life Sciences, Bharathidasan University, Tiruchirappalli 620 024, India
 










 

 

 

 

 


Publications

Book

  • S. Parthasarathy, Essentials of Programming in C for Life Sciences, Ane Books India, New Delhi. First Edition 2008, ISBN 978-81-8052-261-1; Second Edition, 2011, ISBN 978-93-8116-208-8.

Research Articles in Peer Reviews Journals

  • S. Parthasarathy and M. Lakshmanan, On the exact solutions of the Duffing oscillator, Journal of Sound and Vibration, 137 (1990) 523-526.
  • B. Dey and S. Parthasarathy, Spatial chaos in Nonlinear monatomic chain, Physical Review B, 42 (1990) 6433-6437.
  • S. Parthasarathy and M. Lakshmanan, On the analytic structure of the driven pendulum, Journal of Physics A, 23 (1990) L1223-L1228.
  • S.Parthasarathy, Singularity Structure and Chaotic Dynamics of the Parametrically Driven Duffing Oscillator, in: "Symmetries and Singularity Structures: Integrability and Chaos in Nonlinear Dynamical Systems" (Eds.) M.Lakshmanan and M.Daniel, (Springer, Heidelberg, 1990) pp.104-111.
  • S.Parthasarathy and M.Lakshmanan, Analytic structure of the damped driven Morse oscillator, Physics Letters A, 157 (1991) 365-370.
  • S.Rajasekar, S.Parthasarathy and M.Lakshmanan, Prediction of Horseshoe chaos in BVP and DVP oscillators, Chaos, Solitons & Fractals, 2 (1992) 271-280.
  • S.Parthasarathy, Homoclinic bifurcation sets of the parametrically driven Duffing oscillator, Physical Review A, 46 (1992) 2147-2150.
  • T.C.Bountis, L.B.Drossos, M.Lakshmanan and S.Parthasarathy, On the non- integrability of a family of Duffing-van der Pol oscillators, Journal of Physics A 26 (1993) 6927-6942.
  • S.Parthasarathy and Somdatta Sinha, Controlling of Chaos in Unidimensional Maps using Constant Feedback, Physical Review E, 51 (1995) 6239-6242.
  • Somdatta Sinha and S.Parthasarathy, Unusual Dynamics of Extinction in a Simple Ecological Model, Proceedings of National Academy of Sciences (USA) 93 (1996) 1504-1508.
  • S.Parthasarathy and J.M.Dixon, Analytic structure and chaotic dynamics of the damped driven Toda oscillator, Physical Review E, 55 (1997) 3942-3947.
  • S.Parthasarathy and J.Guemez, Synchronization of chaotic metapopulations in a cascade of coupled logistic map models, Ecological Modelling, 106 (1998) 17-25.
  • N.Parekh, S.Parthasarathy and S.Sinha, Global and local control of spatiotemporal chaos in coupled map lattices, Physical Review Letters, 81 (1998) 1401-1403.
  • S.Parthasarathy and S.Rajasekar, Probability distribution characteristics of chaos in a simple population model and the BVP oscillator, Physical Review E 58 (1998) 6839-6842.
  • M.G.Munteanu, K.Vlahovicek, S.Parthasarathy, I.Simon and S.Pongor, Rod Models of DNA: Sequence-dependent anisotropic elastic modelling of local phenomena, Trends in Biochemical Sciences, 23 (1998) 341-347.
  • J. Murvai, K. Vlahovicek, E.Barta, S.Parthasarathy, H.Heagyi, F.Pfeiffer and S.Pongor, The Domain Server: Direct Prediction of Protein Domain Homologies from BLAST Search, Bioinformatics 15 (1999) 343-344.
  • P.Muruganandam, S.Parthasarathy and M.Lakshmanan, Comment on `Intermittent Synchronization in a Pair of Coupled Chaotic Pendula, Phys. Rev. Lett. 83 (1999) 1259.
  • A.Venkatesan, S.Parthasarathy, M.Lakshmanan, Occurrence of multiple-period-doubling bifurcation route to chaos in periodically pulsed chaotic dynamical systems, Chaos, Solitons & Fractals, 18 (2003) 891-898.
  • S.Parthasarathy and K.Srinivasan, Multiple period-doubling bifurcation route to chaos in periodically pulsed chaotic oscillators, Proc. of Dynamic Systems and Applications, 4 (2004),80-86.
  • R.Jothi, K.Manikandakumar, K.Ganesan and S.Parthasarathy, On the analysis of the virulence nature of TIGR4 and R6 strains of Streptococcus pneumoniae using genome comparison tools, J. Chem. Sci., 119 (2007) 559-563.
  • S.Parthasarathy, K.Manikandakumar, K.Ganesan, R.Jothi and R.Natarajan, Chaos Game Representation of Protein Sequence Families, Proc. of Dynamic Systems and Applications 5 (2007) 376-379.
  • R.Jothi, S.Parthasarathy and K.Ganesan, Comparison of the virulence factors of TIGR4, D39, G54 and R6 strains of Streptococcus pneumoniae using comparative genomics tools, J. Comp. Sci. Syst. Biol. 1 (2008) 103-118.
  • R.Jothi, S.Parthasarathy and K.V.Krishnamurthy, Computational internal sequence repeats analysis of accelerated evolution and the role of extensins involved in abiotic and biotic stresses, Open Access Bioinformatics, 2 (2010) 157-168.
  • K.Ganesan and S.Parthasarathy, PSS-3D1D: An improved 3D1D profile method of protein fold recognition for twilight zone sequence annotation, J. Struct. Funct. Genomics, 12(4) (2011) 181-189.
  • V.Suresh, K.Ganesan and S.Parthasarathy, PDB-2-PB: A curated online Protein Block sequence database, J. Appl. Cryst. 45 (2012) 127-129.
  • V.Suresh, K.Ganesan and S.Parthasarathy, PredictFold-PB: A Protein Block based Fold Recognition Server for the Annotation of Twilight Zone Sequences, Protein & Peptide Letters (2012), 19(12).
  • R.Jothi, Jannet Vennila and S.Parthasarathy, Computational studies on the resistance of Penicillin-Binding Protein 2B (PBP2B) of wild and mutant strains of Streptococcus pneumoniae against β-lactam antibiotics, (2012) submitted.
  • V.Suresh and S.Parthasarathy, SVM-PB-Pred: SVM Based Protein Block Prediction Method using Position Specific Scoring Matrix Profiles and Secondary Structures. (2012) Submitted.

© Copyright 2010 S. Parthasarathy, Bharathidasan University, India